Ai Haibara (autonym Shiho Miyano a.k.a. Sherry). A woman with three identities, who boldly faces her destiny. Shiho Miyano (code name: Sherry), a scientist and a member of the Black Organization. The organization was the one that developed a mysterious poison APTX (Apotoxin) 4869, the drug that turned Shinichi Kudo into a little boy! However, when Sherry realizes that the Black Organization has murdered her sister Akemi, she betrays the Black Organization and decides to take APTX4869. The drug turns her into a little girl, and she decides to call herself Ai Haibara in order to hide from the Black Organization. Yet slowly but surely, the Black Organization begins to cast its shadow over her.

While visiting Hachijo-jima, Conan sneaks aboard a security boat heading to the Pacific Buoy, an off-shore facility constructed near the coasts built to connect surveillance cameras used by police forces around the world. However, an engineer gets abducted! An eerie sound of a propeller hums underwater as a dark figure begins to creep toward Ai Haibara... When the forbidden Black Box is opened, the sealed-away past will surface above the treacherous waves!

The son of a world famous mystery writer, Jimmy Kudo, has achieved his own notoriety by assisting the local police as a student detective. He has always been able to solve the most difficult of criminal cases using his wits and power of reason.

Shibuya, Tokyo, is bustling with the Halloween season. A wedding is being held at Shibuya Hikarie, where Detective Miwako Sato of the Metropolitan Police Department is dressed in a wedding dress. While Conan and the other invited guests are watching, an assailant suddenly bursts in, and Detective Wataru Takagi, who was trying to protect Sato, is injured. Takagi survived and the situation was settled, but in Sato's eyes, the image of the grim reaper that she had seen when Detective Matsuda, the man she had been in love with, had been killed in a series of bombings three years ago, overlapped with Takagi's.

The explosion of a new Tokyo Subway line leads Conan and his friends in a snow-clad village. Here, after eight years, the little detective sheds light on the dynamics behind the shocking event that caused the death of a woman and the coma of a 15-year-old boy. Under the beautiful snow, Conan gets involved in something bigger than him.

Noah's Ark, the latest innovation in VR technology, is set for a showcase to Japan's privileged children. However, their carefree fun is cut short when a company employee is found murdered, with his dying message pointing to a clue hidden within the Ark. Along with the Detective Boys and Ran Mouri, Conan Edogawa enters Noah's Ark to solve this mystery and ensure the perpetrator is caught.

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On a dark night, the Japanese police is raided by a spy. Different countries' intelligence agencies - such as England's MI6, Germany's BDN, and America's CIA - as well as the FBI's secret files are going to be taken, but public safety officers lead by Tooru Amuro arrive just in time. The spy steals a car and escapes. The spy and Amuro are then locked in a dead heat on the highway, and just as it is about to cause an accident with multiple cars, the spy's car is hit by FBI agent Shuichi Akai's rifle bullet and falls of the roadway. The next day, Conan and his friends go to a newly-remodeled aquarium in Tokyo. Under the main attraction, a Ferris wheel, Conan finds an attractive woman alone and injured. Her left and right eyes are different colors.

At the opening ceremony of the WSG (World Sports Games) Tokyo Games, a sports festival held once every four years, it is announced that the world's first vacuum superconducting maglev with a maximum speed of 1,000 kilometers per hour will open. While attracting attention from around the world, top executives of large companies are kidnapped from the party venue where WSG tournament sponsors gather. Conan moves toward a solution and eventually finds a connection with the WSG abduction case that occurred 15 years ago in Boston, USA.

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